linelist: Tagging and Validating Epidemiological Data
Provides tools to help storing and handling case line list data. The 'linelist' class adds a tagging system to classical 'data.frame' objects to identify key epidemiological data such as dates of symptom onset, epidemiological case definition, age, gender or disease outcome. Once tagged, these variables can be seamlessly used in downstream analyses, making data pipelines more robust and reliable.
| Version: | 2.0.0 |
| Depends: | R (≥ 4.1.0) |
| Imports: | checkmate, rlang, tidyselect |
| Suggests: | callr, dplyr, knitr, outbreaks, rmarkdown, spelling, testthat, tibble |
| Published: | 2025-04-23 |
| DOI: | 10.32614/CRAN.package.linelist |
| Author: | Hugo Gruson  [aut,
cre],
Thibaut Jombart [aut, ccp],
Tim Taylor [ctb],
Chris Hartgerink
[rev] |
| Maintainer: | Hugo Gruson <hugo at data.org> |
| BugReports: | https://github.com/epiverse-trace/linelist/issues |
| License: | MIT + file LICENSE |
| URL: | https://epiverse-trace.github.io/linelist/, https://github.com/epiverse-trace/linelist |
| NeedsCompilation: | no |
| Language: | en-GB |
| Citation: | linelist citation info |
| Materials: | NEWS |
| In views: | Epidemiology |
| CRAN checks: | linelist results |
Documentation:
| Reference manual: | linelist.pdf |
| Vignettes: |
Compatibility with dplyr (source, R code) Design Principles for linelist (source, R code) An introduction to linelist (source, R code) Software permissions and regulations (source, R code) |
Downloads:
| Package source: | linelist_2.0.0.tar.gz |
| Windows binaries: | r-devel: linelist_2.0.0.zip, r-release: linelist_2.0.0.zip, r-oldrel: linelist_2.0.0.zip |
| macOS binaries: | r-release (arm64): linelist_2.0.0.tgz, r-oldrel (arm64): linelist_2.0.0.tgz, r-release (x86_64): linelist_2.0.0.tgz, r-oldrel (x86_64): linelist_2.0.0.tgz |
| Old sources: | linelist archive |
Reverse dependencies:
| Reverse imports: | cleanepi, vaccineff |
Linking:
Please use the canonical form https://CRAN.R-project.org/package=linelist to link to this page.