## ----message=FALSE, echo=FALSE------------------------------------------------ library(gadget3) library(magrittr) if (nzchar(Sys.getenv('G3_TEST_TMB'))) options(gadget3.tmb.work_dir = gadget3:::vignette_base_dir('work_dir')) ## ----eval=FALSE--------------------------------------------------------------- # out <- new.env(parent = emptyenv()) # out[[step_id(run_at, 1, stock)]] <- g3_step(f_substitute(~{ # debug_label("g3a_mature for ", stock) # # Matured stock will weigh the same # stock_with(stock, stock_with(matured, matured__wgt <- stock__wgt)) # # stock_iterate(stock, stock_intersect(matured, if (run_f) { # debug_label("Move matured ", stock, " into temporary storage") # stock_ss(matured__num) <- stock_ss(stock__num) * maturity_f # stock_ss(stock__num) <- stock_ss(stock__num) - stock_ss(matured__num) # })) # }, list(run_f = run_f, maturity_f = maturity_f))) ## ----------------------------------------------------------------------------- st_imm <- g3_stock(c("st", "imm"), 1:10) g3_to_r(list( g3a_naturalmortality( st_imm, g3_formula( parrot**2, parrot = 0, "-01:ut:parrot" = g3_formula({ parrot <- runif(1) }))), NULL ))