Last updated on 2025-07-20 03:49:36 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.44 | 249.54 | 262.98 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.65 | 221.74 | 232.39 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.45 | 273.53 | 287.98 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.66 | 250.48 | 264.14 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 175.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 183.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 195.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 234.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/125s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.535, system: 0.054, elapsed: 2.130 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.913, system: 0.120, elapsed: 11.945 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.014, elapsed: 0.302 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.740, system: 0.204, elapsed: 4.937 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.224 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.085, system: 0.420, elapsed: 20.249 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.496, system: 0.037, elapsed: 2.347 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.016, system: 0.091, elapsed: 12.904 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.010, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.749, system: 0.166, elapsed: 6.106 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.294 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.148, system: 0.328, elapsed: 22.748 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.526, system: 0.034, elapsed: 2.717 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.958, system: 0.086, elapsed: 14.473 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.301 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.758, system: 0.179, elapsed: 8.691 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.429 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.133, system: 0.220, elapsed: 1.922 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.343, system: 0.563, elapsed: 29.788 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.429, system: 0.031, elapsed: 3.580 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.981, system: 0.068, elapsed: 19.308 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.313 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.758, system: 0.181, elapsed: 6.540 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.193 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.133, system: 0.446, elapsed: 14.161 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.312, system: 0.771, elapsed: 45.412 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/146s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.512, system: 0.040, elapsed: 3.004 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.949, system: 0.071, elapsed: 21.001 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.015, elapsed: 0.556 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.629, system: 0.185, elapsed: 9.725 seconds]
Computing values for grid cells...
... done. [user: 0.153, system: 0.003, elapsed: 0.392 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.958, system: 0.331, elapsed: 35.778 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.500, system: 0.028, elapsed: 4.326 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.025, system: 0.067, elapsed: 23.622 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.366 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.634, system: 0.159, elapsed: 6.468 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.294 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.053, system: 0.289, elapsed: 36.385 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.551, system: 0.034, elapsed: 3.003 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.043, system: 0.071, elapsed: 11.496 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.010, elapsed: 0.199 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.430, system: 0.148, elapsed: 3.789 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.222 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.076, system: 0.214, elapsed: 1.069 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.086, system: 0.517, elapsed: 20.823 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.485, system: 0.030, elapsed: 2.752 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.883, system: 0.052, elapsed: 19.573 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.438 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.576, system: 0.163, elapsed: 6.765 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.267 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.141, system: 0.462, elapsed: 15.555 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.067, system: 0.749, elapsed: 46.553 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64