Last updated on 2025-11-05 03:50:13 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.73 | 259.99 | 272.72 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.64 | 232.61 | 243.25 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.09 | 247.00 | 260.09 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 198.00 | 210.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 16.00 | 188.00 | 204.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/144s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.611, system: 0.045, elapsed: 2.539 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.503, system: 0.096, elapsed: 13.638 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.014, elapsed: 0.256 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.869, system: 0.199, elapsed: 4.746 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.007, elapsed: 0.211 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.932, system: 0.387, elapsed: 22.153 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.587, system: 0.058, elapsed: 2.163 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.714, system: 0.259, elapsed: 14.807 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.017, elapsed: 0.360 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.290, system: 0.281, elapsed: 7.072 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.008, elapsed: 0.214 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.528, system: 0.651, elapsed: 25.385 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.758, system: 0.078, elapsed: 2.553 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.744, system: 0.220, elapsed: 20.717 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.017, elapsed: 0.355 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.169, system: 0.282, elapsed: 7.876 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.008, elapsed: 0.445 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.268, system: 0.249, elapsed: 1.520 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.959, system: 0.886, elapsed: 34.508 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.743, system: 0.071, elapsed: 3.139 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.881, system: 0.307, elapsed: 17.066 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.211, system: 0.026, elapsed: 0.440 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.398, system: 0.406, elapsed: 8.950 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.010, elapsed: 0.300 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.192, system: 0.745, elapsed: 20.745 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.280, system: 1.619, elapsed: 52.055 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/136s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.846, system: 0.110, elapsed: 3.410 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.936, system: 0.278, elapsed: 17.626 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.017, elapsed: 0.448 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.875, system: 0.220, elapsed: 6.355 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.009, elapsed: 0.327 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.605, system: 0.671, elapsed: 29.247 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.649, system: 0.045, elapsed: 2.578 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.718, system: 0.100, elapsed: 15.612 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.012, elapsed: 0.275 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.911, system: 0.180, elapsed: 6.309 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.005, elapsed: 0.237 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.203, system: 0.377, elapsed: 25.880 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.660, system: 0.044, elapsed: 2.456 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.585, system: 0.107, elapsed: 14.286 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.012, elapsed: 0.277 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.913, system: 0.182, elapsed: 5.380 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.015, elapsed: 0.263 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.119, system: 0.272, elapsed: 1.020 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.319, system: 0.668, elapsed: 24.611 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.628, system: 0.054, elapsed: 2.532 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.677, system: 0.237, elapsed: 15.720 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.015, elapsed: 0.271 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.962, system: 0.236, elapsed: 7.964 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.004, elapsed: 0.432 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.862, system: 0.550, elapsed: 18.912 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.156, system: 1.132, elapsed: 47.039 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64