Last updated on 2025-09-26 03:52:03 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.43 | 241.06 | 253.49 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.17 | 238.65 | 248.82 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 355.03 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.43 | 272.92 | 286.35 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.63 | 254.74 | 270.37 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 261.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 182.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 239.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 233.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/187s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.562, system: 0.071, elapsed: 2.998 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.176, system: 0.304, elapsed: 16.016 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.026, elapsed: 0.432 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.016, system: 0.395, elapsed: 12.295 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.011, elapsed: 0.687 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.669, system: 0.843, elapsed: 33.662 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.597, system: 0.086, elapsed: 3.865 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.247, system: 0.317, elapsed: 17.810 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.019, elapsed: 0.339 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.076, system: 0.364, elapsed: 9.372 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.008, elapsed: 0.433 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.817, system: 0.833, elapsed: 33.308 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.809, system: 0.116, elapsed: 3.874 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.434, system: 0.438, elapsed: 16.824 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.029, elapsed: 0.387 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.983, system: 0.403, elapsed: 6.658 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.011, elapsed: 0.247 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.211, system: 0.303, elapsed: 1.277 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.431, system: 1.350, elapsed: 30.346 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.713, system: 0.118, elapsed: 2.904 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.348, system: 0.377, elapsed: 32.967 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.023, elapsed: 0.881 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.917, system: 0.308, elapsed: 13.789 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.007, elapsed: 0.510 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.490, system: 0.672, elapsed: 26.663 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.522, system: 1.584, elapsed: 79.723 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/163s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.768, system: 0.130, elapsed: 2.554 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.246, system: 0.371, elapsed: 16.779 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.020, elapsed: 0.305 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.841, system: 0.339, elapsed: 7.327 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.011, elapsed: 0.343 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.749, system: 0.909, elapsed: 28.383 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.766, system: 0.118, elapsed: 3.300 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.195, system: 0.370, elapsed: 15.755 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.024, elapsed: 0.457 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.874, system: 0.340, elapsed: 6.150 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.013, elapsed: 0.254 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.752, system: 0.910, elapsed: 27.092 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.724, system: 0.089, elapsed: 2.631 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.089, system: 0.267, elapsed: 19.784 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.023, elapsed: 0.863 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.794, system: 0.334, elapsed: 9.781 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.025, elapsed: 0.430 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.121, system: 0.306, elapsed: 1.215 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.753, system: 1.106, elapsed: 36.373 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.669, system: 0.082, elapsed: 2.918 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.222, system: 0.330, elapsed: 21.348 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.018, elapsed: 0.552 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.703, system: 0.278, elapsed: 8.372 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.009, elapsed: 0.390 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.349, system: 0.653, elapsed: 25.965 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.969, system: 1.413, elapsed: 60.980 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64