CRAN Package Check Results for Package cthist

Last updated on 2025-08-30 03:49:33 CEST.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	2.1.11	3.04	35.57	38.61	ERROR
r-devel-linux-x86_64-debian-gcc	2.1.11	2.03	26.86	28.89	ERROR
r-devel-linux-x86_64-fedora-clang	2.1.12			58.64	OK
r-devel-linux-x86_64-fedora-gcc	2.1.12			56.99	OK
r-devel-windows-x86_64	2.1.11	5.00	65.00	70.00	OK
r-patched-linux-x86_64	2.1.11	3.03	34.41	37.44	ERROR
r-release-linux-x86_64	2.1.11	2.80	34.02	36.82	OK
r-release-macos-arm64	2.1.11			43.00	OK
r-release-macos-x86_64	2.1.12			59.00	OK
r-release-windows-x86_64	2.1.11	6.00	67.00	73.00	OK
r-oldrel-macos-arm64	2.1.11			47.00	OK
r-oldrel-macos-x86_64	2.1.12			65.00	OK
r-oldrel-windows-x86_64	2.1.11	6.00	68.00	74.00	ERROR

Check Details

Version: 2.1.11
Check: tests
Result: ERROR Running ‘testthat.R’ [9s/29s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(cthist) > > test_check("cthist") NCT02586649 - 4 of 4 2025-08-28 22:58:44.808259 NCT02586649 processed (4 versions, 100%) Rows: 1 Columns: 29 -- Column specification -------------------------------------------------------- Delimiter: "," chr (20): nctid, overall_status, study_start_date_precision, primary_comple... dbl (3): version_number, total_versions, enrolment lgl (3): accepts_healthy_volunteers, whystopped, results_posted date (3): version_date, study_start_date, primary_completion_date i Use `spec()` to retrieve the full column specification for this data. i Specify the column types or set `show_col_types = FALSE` to quiet this message. NCT04338971 - 1 of 4 NCT04338971 - 2 of 4 NCT04338971 - 3 of 4 NCT04338971 - 4 of 4 2025-08-28 22:58:48.791714 NCT04338971 processed (4 versions, 100%) Rows: 4 Columns: 29 -- Column specification -------------------------------------------------------- Delimiter: "," chr (20): nctid, overall_status, study_start_date_precision, primary_comple... dbl (3): version_number, total_versions, enrolment lgl (3): accepts_healthy_volunteers, whystopped, results_posted date (3): version_date, study_start_date, primary_completion_date i Use `spec()` to retrieve the full column specification for this data. i Specify the column types or set `show_col_types = FALSE` to quiet this message. [ FAIL 1 | WARN 0 | SKIP 0 | PASS 30 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-clinicaltrials_gov_version_criteria.R:9:9'): ClinicalTrials.gov criteria downloads correctly ── version$criteria (`actual`) not equal to "Inclusion Criteria (MCI patients):<ul><li>right handedness</li><li>amnestic and amnestic plus MCI with:<ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul>Exclusion Criteria:<ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" (`expected`). lines(actual) vs lines(expected) - "Inclusion Criteria (MCI patients):<ul><li>right handedness</li><li>amnestic and amnestic plus MCI with:<ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul>Exclusion Criteria:<ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g." - "previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" + "Inclusion Criteria (MCI patients):<ul><li>right handedness</li><li>amnestic and amnestic plus MCI with:<ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul>Exclusion Criteria:<ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 30 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 2.1.11
Check: tests
Result: ERROR Running ‘testthat.R’ [5s/24s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(cthist) > > test_check("cthist") NCT02586649 - 4 of 4 2025-08-29 15:19:53.91968 NCT02586649 processed (4 versions, 100%) Rows: 1 Columns: 29 -- Column specification -------------------------------------------------------- Delimiter: "," chr (20): nctid, overall_status, study_start_date_precision, primary_comple... dbl (3): version_number, total_versions, enrolment lgl (3): accepts_healthy_volunteers, whystopped, results_posted date (3): version_date, study_start_date, primary_completion_date i Use `spec()` to retrieve the full column specification for this data. i Specify the column types or set `show_col_types = FALSE` to quiet this message. NCT04338971 - 1 of 4 NCT04338971 - 2 of 4 NCT04338971 - 3 of 4 NCT04338971 - 4 of 4 2025-08-29 15:19:57.609748 NCT04338971 processed (4 versions, 100%) Rows: 4 Columns: 29 -- Column specification -------------------------------------------------------- Delimiter: "," chr (20): nctid, overall_status, study_start_date_precision, primary_comple... dbl (3): version_number, total_versions, enrolment lgl (3): accepts_healthy_volunteers, whystopped, results_posted date (3): version_date, study_start_date, primary_completion_date i Use `spec()` to retrieve the full column specification for this data. i Specify the column types or set `show_col_types = FALSE` to quiet this message. [ FAIL 1 | WARN 0 | SKIP 0 | PASS 30 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-clinicaltrials_gov_version_criteria.R:9:9'): ClinicalTrials.gov criteria downloads correctly ── version$criteria (`actual`) not equal to "Inclusion Criteria (MCI patients):<ul><li>right handedness</li><li>amnestic and amnestic plus MCI with:<ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul>Exclusion Criteria:<ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" (`expected`). lines(actual) vs lines(expected) - "Inclusion Criteria (MCI patients):<ul><li>right handedness</li><li>amnestic and amnestic plus MCI with:<ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul>Exclusion Criteria:<ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g." - "previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" + "Inclusion Criteria (MCI patients):<ul><li>right handedness</li><li>amnestic and amnestic plus MCI with:<ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul>Exclusion Criteria:<ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 30 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.1.11
Check: tests
Result: ERROR Running ‘testthat.R’ [9s/30s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(cthist) > > test_check("cthist") NCT02586649 - 4 of 4 2025-08-27 10:53:55.657064 NCT02586649 processed (4 versions, 100%) Rows: 1 Columns: 29 -- Column specification -------------------------------------------------------- Delimiter: "," chr (20): nctid, overall_status, study_start_date_precision, primary_comple... dbl (3): version_number, total_versions, enrolment lgl (3): accepts_healthy_volunteers, whystopped, results_posted date (3): version_date, study_start_date, primary_completion_date i Use `spec()` to retrieve the full column specification for this data. i Specify the column types or set `show_col_types = FALSE` to quiet this message. NCT04338971 - 1 of 4 NCT04338971 - 2 of 4 NCT04338971 - 3 of 4 NCT04338971 - 4 of 4 2025-08-27 10:54:00.035728 NCT04338971 processed (4 versions, 100%) Rows: 4 Columns: 29 -- Column specification -------------------------------------------------------- Delimiter: "," chr (20): nctid, overall_status, study_start_date_precision, primary_comple... dbl (3): version_number, total_versions, enrolment lgl (3): accepts_healthy_volunteers, whystopped, results_posted date (3): version_date, study_start_date, primary_completion_date i Use `spec()` to retrieve the full column specification for this data. i Specify the column types or set `show_col_types = FALSE` to quiet this message. [ FAIL 1 | WARN 0 | SKIP 0 | PASS 30 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-clinicaltrials_gov_version_criteria.R:9:9'): ClinicalTrials.gov criteria downloads correctly ── version$criteria (`actual`) not equal to "Inclusion Criteria (MCI patients):<ul><li>right handedness</li><li>amnestic and amnestic plus MCI with:<ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul>Exclusion Criteria:<ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" (`expected`). lines(actual) vs lines(expected) - "Inclusion Criteria (MCI patients):<ul><li>right handedness</li><li>amnestic and amnestic plus MCI with:<ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul>Exclusion Criteria:<ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g." - "previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" + "Inclusion Criteria (MCI patients):<ul><li>right handedness</li><li>amnestic and amnestic plus MCI with:<ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul>Exclusion Criteria:<ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 30 ] Error: Test failures Execution halted Flavor: r-patched-linux-x86_64

Version: 2.1.11
Check: tests
Result: ERROR Running 'testthat.R' [77s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(cthist) > > test_check("cthist") NCT02586649 - 4 of 4 2025-08-29 15:31:43.129631 NCT02586649 processed (4 versions, 100%) Rows: 1 Columns: 29 -- Column specification -------------------------------------------------------- Delimiter: "," chr (20): nctid, overall_status, study_start_date_precision, primary_comple... dbl (3): version_number, total_versions, enrolment lgl (3): accepts_healthy_volunteers, whystopped, results_posted date (3): version_date, study_start_date, primary_completion_date i Use `spec()` to retrieve the full column specification for this data. i Specify the column types or set `show_col_types = FALSE` to quiet this message. NCT04338971 - 1 of 4 NCT04338971 - 2 of 4 Version caused a warning: NCT04338971 version 2 Here's the original warning message: simpleWarning in open.connection(con, "rb"): URL 'https://clinicaltrials.gov/api/int/studies/NCT04338971/history/2': Timeout of 60 seconds was reached [ FAIL 2 | WARN 0 | SKIP 0 | PASS 29 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-clinicaltrials_gov_version_criteria.R:9:9'): ClinicalTrials.gov criteria downloads correctly ── version$criteria (`actual`) not equal to "Inclusion Criteria (MCI patients):<ul><li>right handedness</li><li>amnestic and amnestic plus MCI with:<ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul>Exclusion Criteria:<ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" (`expected`). lines(actual) vs lines(expected) - "Inclusion Criteria (MCI patients):<ul><li>right handedness</li><li>amnestic and amnestic plus MCI with:<ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul>Exclusion Criteria:<ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g." - "previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" + "Inclusion Criteria (MCI patients):<ul><li>right handedness</li><li>amnestic and amnestic plus MCI with:<ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul>Exclusion Criteria:<ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" ── Error ('test-overall_status_lengths.R:2:5'): Overall status lengths parse correctly ── Error in `versiondata$ostatus`: $ operator is invalid for atomic vectors Backtrace: ▆ 1. ├─cthist::clinicaltrials_gov_download("NCT04338971") at test-overall_status_lengths.R:2:5 2. │ ├─... %>% ... 3. │ └─tibble::tribble(...) 4. │ └─tibble:::extract_frame_data_from_dots(...) 5. │ └─rlang::list2(...) 6. └─readr::write_csv(., file = output_filename, append = TRUE) 7. └─readr::write_delim(...) 8. ├─base::stopifnot(is.data.frame(x)) 9. └─base::is.data.frame(x) [ FAIL 2 | WARN 0 | SKIP 0 | PASS 29 ] Error: Test failures Execution halted Flavor: r-oldrel-windows-x86_64