Last updated on 2025-10-30 02:48:57 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.9 | 19.56 | 78.05 | 97.61 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 2.1.9 | 13.40 | 56.08 | 69.48 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 2.1.9 | 40.00 | 106.40 | 146.40 | NOTE | |
| r-devel-linux-x86_64-fedora-gcc | 2.1.9 | 44.00 | 116.04 | 160.04 | NOTE | |
| r-devel-windows-x86_64 | 2.1.9 | 26.00 | 109.00 | 135.00 | NOTE | |
| r-patched-linux-x86_64 | 2.1.9 | 19.90 | 74.27 | 94.17 | NOTE | |
| r-release-linux-x86_64 | 2.1.9 | 18.86 | 74.37 | 93.23 | NOTE | |
| r-release-macos-arm64 | 2.1.9 | 10.00 | 44.00 | 54.00 | NOTE | |
| r-release-macos-x86_64 | 2.1.9 | 14.00 | 79.00 | 93.00 | NOTE | |
| r-release-windows-x86_64 | 2.1.9 | 28.00 | 115.00 | 143.00 | NOTE | |
| r-oldrel-macos-arm64 | 2.1.9 | 9.00 | 42.00 | 51.00 | NOTE | |
| r-oldrel-macos-x86_64 | 2.1.9 | 11.00 | 63.00 | 74.00 | NOTE | |
| r-oldrel-windows-x86_64 | 2.1.9 | 34.00 | 133.00 | 167.00 | NOTE |
Version: 2.1.9
Check: Rd files
Result: NOTE
checkRd: (-1) getPathToAttractor.Rd:23: Lost braces; missing escapes or markup?
23 | Specifies whether the actual attractor states are included in the resulting table or not. If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. This corresponds to the behaviour prior to \pkg{BoolNet} version 1.5. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state. In this case, the sequence can be empty if the start state is an attractor state.
| ^
checkRd: (-1) plotSequence.Rd:42: Lost braces; missing escapes or markup?
42 | Specifies whether the actual attractor states are included in the plot or not (see also \code{\link{getPathToAttractor}}). If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state.
| ^
checkRd: (-1) sequenceToLaTeX.Rd:37: Lost braces; missing escapes or markup?
37 | Specifies whether the actual attractor states are included in the table or not (see also \code{\link{getPathToAttractor}}). If \code{includeAttractorStates = "all"} (which is the default behaviour), the sequence ends when the attractor was traversed once. If \code{includeAttractorStates = "first"}, only the first state of attractor is added to the sequence. If {includeAttractorStates = "none"}, the sequence ends with the last non-attractor state.
| ^
checkRd: (-1) simulateSymbolicModel.Rd:64: Lost braces in \itemize; meant \describe ?
checkRd: (-1) simulateSymbolicModel.Rd:66-70: Lost braces in \itemize; meant \describe ?
checkRd: (-1) simulateSymbolicModel.Rd:72-73: Lost braces in \itemize; meant \describe ?
checkRd: (-1) testNetworkProperties.Rd:131: Lost braces; missing escapes or markup?
131 | If {perturb="functions"} or \code{perturb="transitions"} and \code{accumulate=FALSE}, the function returns a vector of percentages of original attractors found in each of the perturbed copies of the original network. If \code{accumulate=TRUE}, the function returns the overall percentage of original attractors found in all perturbed copies.
| ^
checkRd: (-1) testNetworkProperties.Rd:140: Lost braces
140 | code{params} can hold parameters \code{numSamples, flipBits} corresponding to the parameters of \code{\link{perturbTrajectories}} that define how many initial states are drawn and how many bits are flipped.
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64