8a7934ff608d5a04d6fafa25e4c48aba *DESCRIPTION
54b286aa14ec0bbebf60c0daa11e48b1 *NAMESPACE
fbf28edf0d8646428f390fd898447609 *NEWS.md
0e44fb4162f1e4c9d57accb0e6ab9586 *R/angle-functions.R
bea82c766b76af8b5da11b8c975236f0 *R/celltrackR-package.R
13367d59e1c323e28ca47382c6b2a677 *R/cluster-functions.R
a32eb049ac2a27ac91670282babe917c *R/data-structures.R
9447ece9961c130a22b33edbbb34c5a4 *R/datasets.R
9d591208c918c32db50f5e47148b7bd6 *R/functions.R
efc549f79f412cad9842592d8cdf5256 *R/immunemap-integration.R
42998279b78cf40aa35562ab3068b221 *R/internal.R
976acc525197f1475090751837213d9a *R/plotting-tracks.R
324f240be649baf2dd9d281d3a16a24d *R/simulate-tracks.R
a058ac3c13ceb4637666cd9754a08794 *R/subtracks.R
ee234964f10dfd618fc7b79a1520e4e2 *R/track-measures.R
dc2411857ae73da537ffd4850def55bb *R/track-set-transformations.R
4eeaafbb81d45f1dd3ae289f6497ccf5 *build/vignette.rds
17a264c30e6a03c638824d694219a104 *data/BCells.rda
2a40f45c9c60709630c873acabdafdbe *data/Neutrophils.rda
7daf70af16ebfe6ae782fb5d51129870 *data/TCells.rda
21f917c61b7339e470f386d96792ff78 *inst/CITATION
f2b828ea9ff2b5155c7dab2e858d717d *inst/doc/QC.R
31afc4d1978432fcacfa2cc1fbac11b3 *inst/doc/QC.Rmd
c06064ccd9c379fa6e9f542cb8ff4b1d *inst/doc/QC.html
17d40bf27e65f06af6555b5e5a6a4fbf *inst/doc/ana-methods.R
ee3ea5ebf422adc0a3c4019d9633e142 *inst/doc/ana-methods.Rmd
eec0a90672dde2fe0f496206b8ce3637 *inst/doc/ana-methods.html
9cbbc9e199353ac45b9d3e78ddd2614a *inst/doc/clustering.R
0ebed1ac614cc6004018241f683c0c61 *inst/doc/clustering.Rmd
9085d167c7a5f46b6e336d8f85390347 *inst/doc/clustering.html
9336036cdb055c39187ea09892c5f359 *inst/doc/data-QC.R
2f77112ef561b8a2363190179eeb0996 *inst/doc/data-QC.Rmd
7800d91401d757e3f68c90cb9b4fc360 *inst/doc/data-QC.html
3118ed545ba66c7b9ab45fd892fcf499 *inst/doc/reading-converting-data.R
bcb76500ba6f5eecd05878d26684ccc6 *inst/doc/reading-converting-data.Rmd
2d8c7e65ec90aa1852101ab7408b4366 *inst/doc/reading-converting-data.html
10aa2d6213006cedf246733bf99665ec *inst/doc/simulation.R
28568343ca354383394c546f3ea1d1cd *inst/doc/simulation.Rmd
248b86faad1697d24afab526fe653943 *inst/doc/simulation.html
f69708630d07fbde4958f947b72afef7 *inst/extdata/BCellsRaw.rda
e34933aa03bdfcf52498f470cb3b1ce7 *inst/extdata/NeutrophilsRaw.rda
b381f710d8a908ace21af2fa298e49da *inst/extdata/TCellsRaw.rda
42046a5d19f0debd78a0fdc874f9940f *inst/extdata/immunemap.json
98fbb87a8f79998c46983a29450d5d05 *inst/extdata/t-cells.txt
42c0aa349bb09189ce7997281a0be9e4 *inst/learnmore/cheatsheet.pdf
a532f230cbc2315b832218876cae4810 *man/AngleAnalysis.Rd
4788af3892f5ed39163e2e7731440e26 *man/BCells.Rd
1d357a9ac81e878b113cd25f8dd425fb *man/Neutrophils.Rd
7446def4c65cf0733d22f5eee2ec5190 *man/ReadImmuneMap.Rd
dfef7f120454ba0d9dd31be2250643ea *man/TCells.Rd
bc5363990f716dfbfe48b9012b6d6a1f *man/TrackMeasures.Rd
f77d3b4414a97b9354bc7b55f9b6a331 *man/aggregate.tracks.Rd
eedf543b132f7c9a19054bc3b5f9209a *man/analyzeCellPairs.Rd
c8fb929499058b6d9ff57236b6666caf *man/analyzeStepPairs.Rd
cfdcd2c497543ad0f886d7ed8291d4db *man/angleCells.Rd
95467c5c0f4785789d5c2f61e99f462d *man/angleSteps.Rd
491abc427278f1c43c6c4dcc31e3a2f0 *man/angleToDir.Rd
e2cc6559f1c0676eebd23b5e265484e3 *man/angleToPlane.Rd
0214b23a023a660d5d8755062410ca09 *man/angleToPoint.Rd
b071dbc163959187bc8bd708ca2c845b *man/applyStaggered.Rd
3f3d5f773b79a099d9abbe3cce2bf14e *man/as.data.frame.tracks.Rd
ddae866debb33a855651aff4466d9113 *man/as.list.tracks.Rd
14a2f181dc93efc14e5a5aa52703b79d *man/as.tracks.data.frame.Rd
afeb1145bcf3d2b2ff21a4898d680ad4 *man/beaucheminTrack.Rd
2fdb36737f82b86d99e567d9b86ec273 *man/bootstrapTrack.Rd
090175bf94a6a70ca97af2f9f830f49c *man/boundingBox.Rd
03aba4b01e0cd28a7fde56038ddc5df3 *man/brownianTrack.Rd
40a063826078cab5ead00bfe800d6dfd *man/cellPairs.Rd
4cc4195afa0ee4bf4624600a708be2f9 *man/celltrackR.Rd
90dbe41a2e3a3ebead6a1c74dcea415d *man/cheatsheet.Rd
0b09fc36e13558259eea79d9a16a6a7c *man/clusterTracks.Rd
6983bf691447079a257e70b7ded0eb1e *man/distanceCells.Rd
936247d50507ab78e92f2de00c82b976 *man/distanceSteps.Rd
c126aff61ca58481c4ad9aef782d82f5 *man/distanceToPlane.Rd
a08ac1f5a7c0338af80e08dea7305390 *man/distanceToPoint.Rd
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592d5c0dc84e3d08b3722c0fc83bb9f5 *man/filterTracks.Rd
5525ef0730661bee4a0b15bd528ce3d5 *man/get.immap.metadata.Rd
f54022987d5deeff657261a843a52104 *man/getFeatureMatrix.Rd
409195a2c02a42d07744410019182270 *man/hotellingsTest.Rd
a657e1f73bff8fb21066a594a7d48eee *man/interpolateTrack.Rd
f7b97f18accb8a24497713f7ec74a97a *man/maxTrackLength.Rd
f97e8f1620c2cff0ff6fb749025d4750 *man/normalizeToDuration.Rd
339f6875e74d0c40a76c06e7319cda7d *man/normalizeTracks.Rd
4117806236a719193307160c836fe49f *man/pairsByTime.Rd
7b2d6cdf84d2857cebb681a93722eaa6 *man/plot.tracks.Rd
10a616b31eb6be9d81ee0cfb25105ef8 *man/plot3d.Rd
bc46231a96fda0800ce065ff1bbfb5f8 *man/plotTrackMeasures.Rd
85906a8a01f2489ae7f0879da68850cc *man/prefixes.Rd
e849d457556eb0d690b504c7b2f66cdf *man/projectDimensions.Rd
bf5979112431b890ccde578d8c718c21 *man/read.tracks.csv.Rd
1a00bc3c31f1f6883667a21a1b9d3945 *man/repairGaps.Rd
ad66aa72d4132d3c5f92b3909dbc65bd *man/selectSteps.Rd
53bc978480285218537ab094bb81192c *man/selectTracks.Rd
1be21dba79a87260e6b01e04b00aecec *man/simulateTracks.Rd
65621f2cb096ca0603d4648e98823b05 *man/sort.tracks.Rd
cacd31049c4dec78ab77eb2d4d89016a *man/splitTrack.Rd
77c975f0646054ca306f82c409b883cb *man/staggered.Rd
b4120417dd33e3e2116f6807565adf30 *man/stepPairs.Rd
8e7c91feaa25bda07f22c1605eda87ae *man/subsample.Rd
67522c84ce97c1d0a7cccd75bf0e0873 *man/subtracks.Rd
7690c2912bddc481dc6fc461d872aef8 *man/subtracksByTime.Rd
73dcba78e06e85bc830216680327fe81 *man/timePoints.Rd
8b26bd076d1487e7d1f2cb7a7552e5fa *man/timeStep.Rd
46bd8b6dee948f9e08e142256824b9e7 *man/trackFeatureMap.Rd
e282e99e63e31cc302f16dd23d5a8a6e *man/tracks.Rd
511f012da9299d00c6e1dec9da4ae525 *man/vecAngle.Rd
30c5e68becd1d89d284b70af8815e90c *man/wrapTrack.Rd
d96f110f3a09b539639a317878ca15d4 *tests/testthat.R
42046a5d19f0debd78a0fdc874f9940f *tests/testthat/immunemap.json
9626efd311d781cbd14eaa8b594b32eb *tests/testthat/ref_tracks.RData
3a1f4ff5294d5270ebdb5cb11bf593e6 *tests/testthat/ref_tracks.csv
0d67651b428db611174bac12ca6f1635 *tests/testthat/ref_tracks_blank_line_sep.csv
15e70be9c250b8f57e2b742d7a2cd390 *tests/testthat/test1D.R
9e1ad593f68294b20be4c1b0834a0863 *tests/testthat/testAngleFunctions.R
d981319738993bd01ad2c661abc779de *tests/testthat/testAngleInput.R
702d2335fd52a06af9467ee61e9d6f14 *tests/testthat/testBasics.R
2b8c1405843c84b93cb9e29c729938ac *tests/testthat/testBorderCases.R
256266e11c6ef70d1388e6da9dbe6d47 *tests/testthat/testClusterFunctions.R
24031be3469e4dcdba3b84fa9755a7ee *tests/testthat/testDataStructures.R
9bc387cf3b1d2e192de9bd22d48a3e3d *tests/testthat/testImmuneMapIntegration.R
3226fd03bb1aa7d9bd14ebaba880dfb0 *tests/testthat/testLoadingTracks.R
00d3c81efedfad132def4e4a49035203 *tests/testthat/testNumerics.R
7d331b36120f9b85f66a6f3dd8cd5983 *tests/testthat/testSim.R
31afc4d1978432fcacfa2cc1fbac11b3 *vignettes/QC.Rmd
ee3ea5ebf422adc0a3c4019d9633e142 *vignettes/ana-methods.Rmd
0ebed1ac614cc6004018241f683c0c61 *vignettes/clustering.Rmd
2f77112ef561b8a2363190179eeb0996 *vignettes/data-QC.Rmd
bcb76500ba6f5eecd05878d26684ccc6 *vignettes/reading-converting-data.Rmd
28568343ca354383394c546f3ea1d1cd *vignettes/simulation.Rmd
