3bccde44614f65f03112dcc59fcf9dde *DESCRIPTION
ec1e934084264d066a9c1be9a831cea5 *NAMESPACE
80d82fc0db54aa4b20ebf7114c41bd96 *R/data.R
2bee9852f5f2c04db3b29da080ad9739 *R/plot_cutoff.R
ab78e022131eb6c6d68c13e0ed146811 *R/plot_gene.R
89a485f7192aab4eb68c3af13b670c36 *R/plot_heatmap.R
20efa69f74b5a8101c0ccbfb449a3a62 *R/plot_pathway.R
322b1c12c56e1d2c3903a41a25ea1b18 *R/plot_qq.R
4caf91e29c985f6d7898bdb849335deb *R/plot_volcano.R
50b50838de6bc702078bd5517448fbb4 *R/validate.input.R
5529ab9304e072970a4a99ac8b098cb0 *README.md
fd644765076079ba56a578ef7e28eaf3 *build/vignette.rds
26ceb6c6c52f7a9a6299d4fb6397096e *data/Sample_disease_gene_set.rda
e0f4918c76815a5fe6307c83bf126702 *data/Sample_summary_statistics_table.rda
6a9a6c043d424b7b85075804ba541fa6 *data/Sample_summary_statistics_table1.rda
573073706c72920ba34754b7bd23f495 *data/c2BroadSets.rda
54d0ba70dadfe39b416c6f02132c851a *data/count_table.rda
8516fa432d785a8c858ac2c54f75f682 *data/sample_annotation.rda
098870034009618d89e8843501a566d2 *data/sample_count_cpm.rda
e41ca10b2003b8afcda2780ef9527ab0 *data/wpA2020.rda
03f2fa1a40b71b34e5c36882fb4dc794 *inst/doc/RVA.R
d0c08b650c57e694d236c0737d3e3583 *inst/doc/RVA.Rmd
5adc530f2560470f95a73a26fd76df95 *inst/doc/RVA.html
46acf77afa9662db51240106dd1695cd *man/Sample_disease_gene_set.Rd
7d5f7e140973fdad01e49019b9e924c5 *man/Sample_summary_statistics_table.Rd
3b25f4c8f7633d3cedb3eac9d66022eb *man/Sample_summary_statistics_table1.Rd
9f18b6ddba5700664d7fcbd71081cf98 *man/c2BroadSets.Rd
2bd0d5253bf730e210d454bf65af4281 *man/cal.pathway.scores.Rd
520a1f6b00945d4a30f831ae296782bf *man/calc.cfb.Rd
ea690b839985008b8bc9a948886fc639 *man/count_table.Rd
a97dad0e898f7ff1318c10c5efafe2e7 *man/dlPathwaysDB.Rd
20e74e6de02d353989c78d37d50a61b9 *man/get.cpm.colors.Rd
6bd53360c30abda4f8c93bc154cc6ddd *man/get.cutoff.df.Rd
545fc5f71f27f95fda113bae10c68fbe *man/get.cutoff.ggplot.Rd
60435bd8069e48df690c8a641bf58591 *man/make.cutoff.plotly.Rd
e69b05788819b58d20c5befcbaa30bb2 *man/multiPlot.Rd
7e727f4142eee58b0ec6cda5327981bf *man/nullreturn.Rd
5faacc95b315db5cb73c65be91175ff4 *man/plot_cutoff.Rd
0cd692b46ea484842fd2b3697b38610b *man/plot_cutoff_single.Rd
baef3a8a0f92dbc9eb3400ea2b922b9c *man/plot_gene.Rd
13271b7a31d58f9068e7a3081896bd0c *man/plot_heatmap.cfb.Rd
f1e7f62022424fb49c8aa7436bf56223 *man/plot_heatmap.cpm.Rd
a18a5eac0d90a64f3bd6595f887e0242 *man/plot_heatmap.expr.Rd
9cb4dd4d36a12e7020f80681676df5f0 *man/plot_pathway.Rd
ceae7436f75bda517b3d9724502848b8 *man/plot_qq.Rd
d7cdc544cb4376cdd1881869924f51b5 *man/plot_volcano.Rd
22f404db1af61edbbfeca3e658d11eed *man/prettyGraphs.Rd
9be9a1e1d12bce06a0492685686dbb3e *man/produce.cutoff.message.Rd
2d75ce252ebe20772f89f1c58a28f81d *man/produce.cutoff.warning.Rd
33c9bc692e3fdbac1fd085edcd9c8d53 *man/reformat.ensembl.Rd
e8b984cba1c6ad73aec5af1821beda3c *man/sample_annotation.Rd
67c09399df943d7be4ecd93ffea50d50 *man/sample_count_cpm.Rd
20f14545a1c9e5e2e5df7bbb404172a2 *man/secondCutoffErr.Rd
dea45bc00acff2dfd2c0dbda0330615b *man/transform.geneid.Rd
aadb24ae53b1655c0ddbae7d85d93520 *man/validate.FC.Rd
65c85121d5fea19e0819ab4c6d9eab26 *man/validate.annot.Rd
c8e7b951285dfd8419eda7273813d3e4 *man/validate.baseline.Rd
2b48f5d6496e6b74425e804d9ea3f8f3 *man/validate.col.types.Rd
ca402e69611ac968ec05951472c234f2 *man/validate.comp.names.Rd
29af856e8e239719ea439434be4d0e45 *man/validate.data.Rd
fd30131a245a444449be0c8b18b0eb8c *man/validate.data.annot.Rd
ac9f8e52be50e331f847bc1c8dcb127b *man/validate.flag.Rd
113b9d5e5847ea9dddf4cbece147fc3b *man/validate.genes.present.Rd
a22436ac66438094d15b2c0a7c5a3779 *man/validate.geneset.Rd
9cfd7114339a06730a217b606e5ad205 *man/validate.numeric.Rd
8c4b087c3d900ed181b5bb384bde1f3b *man/validate.pathways.db.Rd
257d85192a351b31d548604ba37e49c5 *man/validate.pval.range.Rd
87304b1ee85d1f891ae49884ceb15ee7 *man/validate.pvalflag.Rd
b0123ae377802b7141f54a022fa973a4 *man/validate.pvals.Rd
8d2e8b3ee96826128dbcc230e412b46c *man/validate.single.table.isnotlist.Rd
9ff892753002cfdc74078b037de9092b *man/validate.stats.Rd
fcd3fc566cd3f674e7db4e65544dcf2c *man/validate.stats.cols.Rd
652f7e4304c13d14dc5ba18f0cfa55e8 *man/wpA2020.Rd
d0c08b650c57e694d236c0737d3e3583 *vignettes/RVA.Rmd
