Finding Allele-Specific Copy Number in Whole-Exome Sequencing Data

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Documentation for package ‘falconx’ version 0.2

• DESCRIPTION file.

Help Pages

biasMatrix	Bias Matrix
falconx	Finding Allele-Specific Copy Number in Whole-Exome Sequencing Data
getASCN.x	Getting Allele-specific DNA Copy Number
getChangepoints.x	Getting Change-points
pos	Position (bp)
readMatrix	Reads Matrix
tauhat	Estimated Break Points
view	Viewing Data with Allele-specific Copy Number